Leo Fitz sends D.W.A.R.F.s in the storage room of the Lighthouse where the Kree Orb exploded and destroyed the three Monoliths, but the drones end up destroyed. Meanwhile, Daisy Johnson and Deke Shaw gather medical supplies for Yo-Yo Rodriguez, who tells Alphonso Mackenzie that she intends to remain and fight, despite the loss of her arms. Johnson and Shaw are attacked by a Kree Warrior who nearly kills Shaw before being shot by Johnson and vanishing in the air.
Johnson and Shaw report the attack to their friends and Fitz hypothesizes that the destruction of the three Monoliths caused the creation of a space-time rift opening onto what Fitz calls the Fear Dimension, which taps in their minds to physically manifest their fears: the Kree Warrior, but also recreations of Lash and a subterranean forest which frightens Shaw. Fitz uses Shaw's Gravity Puck to create a Gravity Containment Device which can close the rift. However, the plan requires someone to be ready to sacrifice himself and Phil Coulson offers to be the one.
Johnson, Melinda May and Fitz oppose to the idea of sending Coulson, claiming that they all need him. While Fitz suggests to send Piper and Johnson offers to go herself, Coulson refuses both the propositions, assuming that S.H.I.E.L.D. needs Johnson. A furious argument erupts as Johnson states that S.H.I.E.L.D. no longer exists and that she is the only one who can do the mission. Coulson tries to reply, but he faints due to a sudden respiratory distress. As he regains consciousness, he gives instructions to Shaw who leaves the Lighthouse, and goes to find his friends. Upon getting out, Shaw spots the military as General Hale journeyed to River's End since Johnson was reported by Officer A. Kennedy.
Coulson reveals the consequences of the deal he made with the Spirit of Vengeance to defeat Aida: the demonic being possession cancelled the effects of the GH.325 which had repaired Coulson's damaged tissue in the heart and lungs. As a result, the tissue went necrotic and the necrosis spreads, meaning Coulson is dying. Infuriated and overrun with grief, Johnson leaves the place while May blames Coulson for not having disclosed his condition earlier. Coulson goes to find Johnson and the two have an emotional moment with Johnson telling Coulson that he is everything she believes in. Both of them embrace as Johnson cries.
Rodriguez is attacked by another recreation in the form of an LMD of Simmons, which is destroyed by the real Simmons as it tried to smother Rodriguez with a pillow. Figuring out that the Fear Dimension is expanding and that they are running out of time, Coulson confirms his intent to do the mission after a talk with May. Fitz gives Coulson the Gravity Containment Device along with a gun, and Coulson has Fitz promising that whatever happens, Fitz and Simmons will marry as this will give hope and happiness to the others.
Coulson takes the elevator down to the deepest levels of the Lighthouse, where he encounters a recreation of Mike Peterson. Peterson assumes that he is not hostile and that he will not try anything to stop Coulson. However, Peterson also hints that Coulson is still on the operation table while being resurrected and that everything he thought had happened, from the creation of his team to the events in year 2091, is made up by Coulson's mind from his memories, his regrets and the surgeries performed on him.
Peterson seems to convince Coulson and begins taking him to the space-time rift. However, Coulson eventually stops and claims that he does not believe Peterson. The recreation gets angry and intends to force Coulson to cross the rift, but it is destroyed by the real Deathlok, who has been brought to the Lighthouse along with other S.H.I.E.L.D. agents gathered by Shaw.
Coulson and Deathlok fight several other recreations from the Fear Dimension: Lash, the Vrellnexians and Hive, all of which are destroyed by their combined efforts. In the end, Coulson activates the Gravity Containment Device, which successfully closes the space-time rift, enabling Coulson to return to his friends unscathed.
Following this success, all the S.H.I.E.L.D. agents, including the reinforcements found by Shaw, meet at the underground forest created out of Shaw's mind. Coulson and Shaw accompany Fitz to his wedding with Simmons. Fitz and Simmons exchange their wedding vows in which they express their eternal love and their happiness of having found each other and they are finally married with their friends cheering after all the ordeals their relationship had to overcome. During the ceremony, Shaw informs Deathlok that the ring Simmons is wearing looks exactly like the one his mother used to wear and which came from his grandmother, unaware that Fitz and Simmons actually are his grandparents. At the same time, Hale discovers that Shaw's DNA matches with Fitz's and Simmons'.
- Clark Gregg as Phil Coulson
- Ming-Na Wen as Melinda May
- Chloe Bennet as Daisy Johnson/Quake
- Iain De Caestecker as Leo Fitz
- Elizabeth Henstridge as Jemma Simmons / Jemma Simmons LMD (Recreation)
- Henry Simmons as Alphonso Mackenzie
- Natalia Cordova-Buckley as Yo-Yo Rodriguez
- J. August Richards as Mike Peterson/Deathlok / Mike Peterson (Recreation)
- Jeff Ward as Deke Shaw
- Catherine Dent as General Hale
- Max Osinski as Agent James Davis
- Stewart Skelton as Chief C. Wellins
- Shontae Saldana as Candice Lee
- Brett Dalton as Grant Ward (archive footage; uncredited)
- Unknown as Kree Warrior (Recreation)
- Unknown as Lash (Recreation)
- Unknown as Hive (Recreation)
- Lake Ontario, New York
- River's End, New York
- Seattle, Washington (flashback)
- Saint Agnes Orphanage (mentioned)
- Malta (mentioned)
- Puerto Rico (mentioned)
- Maveth (mentioned)
- Closure of the Fear Dimension's Rift
- Rescue of Joey Gutierrez (flashback)
- Attack on the Helicarrier (mentioned)
- Resurrection of Phil Coulson (mentioned)
- Infiltration into Ian Quinn's Mansion (indirectly mentioned)
- Battle for the Kree City (indirectly mentioned)
- Battle of Maveth (indirectly mentioned)
- Ambush on Aida (indirectly mentioned)
- Phil Coulson's Prosthetic Hand
- Gravity Puck
- Gravity Containment Device
- Backscatter X-Ray Eye Implant
- Centipede Device
- Cybertek Prosthetic Leg
- Forearm Rocket Launcher
- Kree Battle Axe (recreation)
- Quake Gauntlets (flashback)
- Di'Allas (mentioned)
- Kree Orb (mentioned)
- GH.325 (mentioned)
- Framework (mentioned)
- Scepter (mentioned)
- Haig (mentioned)
- Life-Model Decoys (recreation)
- Kree (recreation)
- Chronicoms (mentioned)
- Demons (indirectly mentioned)
- Vrellnexians (recreation)
- Project T.A.H.I.T.I. (mentioned)
- United States Air Force
- River's End Police Department
- Alya Shaw
- Ghost Rider
- Spirit of Vengeance (indirectly mentioned)
- A. Kennedy
- Tony Stark
- Robert Coulson
- Grant Ward (flashback)
- Thor (action figure)
- Hawkeye (action figure)
- Hulk (mask)
- Stay Puft Marshmallow Man
- When Mike Peterson's recreation is talking to Phil Coulson, he uses several phrases that Coulson himself used when talking to the real Mike Peterson during the two's confrontation at the end of the first episode, Pilot: namely, "It matters who you are" and "The good ones, the real deal". Mike also tells Coulson that, above all, he wants "a chance to be a hero"; Pilot ends with Mike being incapacitated after telling Coulson "I could, you know? Be a hero."
- "The real deal" is not only the episode's title, but also eludes to Mike attempting to convince Coulson that his life since he was killed was a dream, and therefore not "the real deal".
- The recreation of Mike Peterson suggests to Phil Coulson that everything he has experienced over the course of Agents of S.H.I.E.L.D. is a falsehood his mind has created on his deathbed. Joss Whedon jokingly made a similar suggestion in an interview with IGN in 2015 while promoting Avengers: Age of Ultron. Although Coulson could not know it, it is actually impossible for his resurrection and all subsequent events to have been a fabrication, because Coulson on his deathbed would have no knowledge of any event taking place after 2012 (such as the existence of Ultron or HYDRA's continued survival and uprising).
- The title sequence of the episode is made from several other title sequences, including the one which was used from Season One, the ones used for the three pods Ghost Rider, LMD and Agents of HYDRA from Season Four and the Season Five opening sequences featuring Earth as pieces and a whole.